BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008D03LP1|AL425845
(711 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1713 785 0.0
>3x_Contig1713
Length = 18539
Score = 785 bits (394), Expect = 0.0
Identities = 625/703 (88%)
Strand = Plus / Minus
Query: 9 gtttgatctcagagggttcccatacgtcccctgaactcaacggggatccagacgtggcga 68
||||||||||||||| |||||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 15958 gtttgatctcagaggattcccatacgtcacctgaactcaacggggatccagaagtggcga 15899
Query: 69 ccctcacggggtccccccccctaggcactttgctctgctccccctgggaaactcctgctt 128
|| | ||||||||| | ||||||||||| |||| ||| |||||||||| ||||||
Sbjct: 15898 ccataacggggtccaaaacaataggcactttgatctgatccaactgggaaactactgctt 15839
Query: 129 tccccgctcctmagttgagcctcccgctcttcatcgcctcgcctctcatgcttctcccat 188
|| |||||| |||||||| ||||| |||| ||||| |||| ||||||||||||| ||
Sbjct: 15838 tcaaagctcctaagttgagcatcccgatcttaatcgcatcgcatctcatgcttctcaaat 15779
Query: 189 tatgacccagcctttctttgatatgctgctcctcggtattgatccccgggtacscttttc 248
||||||| || ||||||||||||||||||| ||||||||||| | ||| ||||||
Sbjct: 15778 tatgaccaagaatttctttgatatgctgctcatcggtattgataaaagaatacacttttc 15719
Query: 249 cgggcgtctgacatgtcaatgccgtyatacccgtcatagcctagcctccttgggcgctaa 308
|||||||||||||||||||||| || |||| ||||||||| |||| |||||| || ||||
Sbjct: 15718 cgggcgtctgacatgtcaatgcagtaatacacgtcatagcatagcatccttgagcactaa 15659
Query: 309 ttgtctttscctcggcttccccgccggcgccccccctgctatcgcttcccgccccggtcc 368
|||||||| | |||||||| ||||||| || || |||||||||||||| ||| |||||
Sbjct: 15658 ttgtctttacatcggcttcaacgccggcaccaccactgctatcgcttccagccacggtca 15599
Query: 369 acccacctggccatttcctctcactcccctgngtgccccggtaccccggtgaactcctct 428
|| |||||||| ||||||||||||||| || |||||| | ||| |||||||| |||
Sbjct: 15598 acacacctggcaatttcctctcactccaatgagtgcccagatacaaaggtgaactaatct 15539
Query: 429 gatactcgccttctttcatcccgtacgcgctgggtactgtctgtttgtgcttgctgatgc 488
|||||||| ||||||||| ||||||||||| |||||| ||||||| |||||||||||
Sbjct: 15538 gatactcgaattctttcataaagtacgcgctggatactgtatgtttgtacttgctgatgc 15479
Query: 489 ttatcaccgatacaacatgcaatggtttaggtaacaagtatattatcaccttcatatggc 548
| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15478 taatcaaagatacaacatgcaatggtttaggtaacaagtatattatcaccttcatatggc 15419
Query: 549 tatctttttatatatgaacttcgattgcggttccaattctaacagtttcccacttgagcg 608
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15418 tatctttttatatatgaacttcgattgcggttccaattctaacagtttcccacttgagcg 15359
Query: 609 aggtcagctgatgacacattttacagctctaaacagtgccataactaacagttaggactg 668
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15358 aggtcagctgatgacacattttacagctctaaacagtgccataactaacagttaggactg 15299
Query: 669 ataaatgggtttccagagtgtactaacagatgtctggtggaag 711
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15298 ataaatgggtttccagagtgtactaacagatgtctggtggaag 15256
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2694
Number of Sequences: 1807
Number of extensions: 2694
Number of successful extensions: 52
Number of sequences better than 1.0e-20: 1
length of query: 711
length of database: 10,358,551
effective HSP length: 16
effective length of query: 695
effective length of database: 10,329,639
effective search space: 7179099105
effective search space used: 7179099105
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)